Scot Kennedy
	scotfree@asis.com
	510-915-4210
	1423b Caroline St, Alameda CA 94501

EDUCATION:
  2000 - Master's Degree in Applied Mathematics, UC Santa Cruz
          - Researcher, Human Genome Project
          - Mathematical Sciences Research Institute:
             "Mathematical and Computational 
              Challenges In Molecular and Cell Biology" 

 SKILLSET:
  Core: Bioinformatics, Applied Math/Statistics, Computer Science,  Teaching
  Languages: Perl,C,Java,SQL,HTML,XML,(La)TeX,PHP,Lisp,Visual Basic,Delphi
  Tools: RDBMS,MatLab,crossmatch/BLAST,consed,phred/phrap,CAP4,etc    
  OS: UNIX (Linux,FreeBSD,Sun,etc), MS (NT,Win),Mac,PalmOS,CP/M,TRS-80

EMPLOYMENT HISTORY:
  Jan 2001 - Present: pharmaceutical target discovery site, Bioengineer I
    -statistical analysis of selection assays and libraries
    -automated/manual sequence/gene annotation and filtering
    -sequence analysis pipeline development & operation
    -presented at client Joint Research Conferences 
    -microarray analysis and training of users
    -'tuning' of bioinformatics tool parameters and data flow
    -biological database design, implementation, and use
    -tools and support for scientists and data-miners
    -cross platform team software development   

  2000: UC Santa Cruz Center for Biomolecular Science & Engineering
	Researcher for Pf. David Haussler / Human Genome Project
    -Human Genome Project (H.G.P.) researcher
    -co-author Feb. 2001 Nature publications on H.G.P.
    -Statistical measurement, analysis and communication for H.G.P.
    -high-volume RDBMS design/implementation/support       
    -statistical analysis of 'GC-content' of Human Genome
    -estimation of coverage within clones for H.G.P. draft assembly
    -Statistical Data for H.G.P. Draft Assembly Paper & Website
    -Association of STS/genetic markers to Draft Assembly       
    -some aspects of Human Genome Browser & data 
    -BAC-end data, test-set construction, Quality Analysis, etc

  1996-2000:  Teaching & Consulting in Math & Computers
    -Developed, maintained, and extended intra-/inter-net software
    -wrote & recieved Grant Proposals
    -Educational/Scientific web publishing training & development
    -Systems/web admin 
    -TA/tutor for math and physics, 
    -Taught www & scientific communication design and scripting classes 
     -Developed and taught entire two quarter sequence in statistics
      (Teaching statistics to art/design students, as well as my extensive
      TA/tutor experience, has developed what I consider a key ability:
      Communicating complex technical ideas to non-specialists.)