CONTACT INFORMATION:
	Scot Kennedy
	scotfree@asis.com
	510-915-4210
	1423b Caroline St, Alameda CA 94501

EDUCATION:
  2000-Master's Applied Mathematics UC Santa Cruz
      -Researcher, Human Genome Project
      -Mathematical Sciences Research Institute 
          Summer Graduate Program & Workshop:
          "Mathematical and Computational 
           Challenges In Molecular and Cell Biology" 

  1996-BA Mathematics UC Santa Cruz

SKILLS:
  Core: Bioinformatics,Math/Statistics,Teaching,Machine Learning & Control  
  Languages: Perl,C,Java,SQL,HTML,XML,(La)TeX,PHP,Lisp,Visual Basic,Delphi
  Tools: MatLab/etc,crossmatch/BLAST,phred/phrap,cap4,DBMS,etc    
  OS: UNIX (Linux,FreeBSD,Sun,Digital,SGI,etc), MS (NT,Win,etc),Mac,PalmOS

EMPLOYMENT HISTORY:
  2001 Jan - Present: Bioinformaticist PPD Discovery (Menlo Park)
    -statistical analysis of selection assays and libraries
    -sequence analysis pipeline development & operation
    -client Joint Research presentations 
    -microarray analysis and training
    -'tuning' of bioinformatics tool parameters and data flow
    -automated/manual sequence/gene annotation and filtering
    -web-based analysis tools for scientists/data-miners
    -cross platform team software development
   
  2000: UC Santa Cruz Center for Biomolecular Science & Engineering
	Researcher for Professor David Haussler (director)
    -Human Genome Project researcher
    -co-author Feb. 2001 Nature publications on HGP
    -Statistical Analyses
      (Wrote tools to both gather statistical information and to 
      allow flexible, web-based access for research and testing)
    -high-volume RDBMS design/implementation/support       
    -data mining for Genome Project
      (BAC-end data, Test-set construction, Quality Analysis, etc)
    -Involved in many aspects of the HGP at UCSC (http://genome.ucsc.edu) 
      Some specific projects I was particularly involved in:
       -statistical analysis of 'GC-content' of Human Genome
       -estimation of coverage within clones
       -Statistical Data for Nature Human Genome Draft Assembly Paper
        (http://genome.ucsc.edu/cgi-bin/crom.cgi)
       -Association of STS/genetic markers to Draft Assembly       
       -some aspects of Human Genome Browser & data 

  1999-2000:  Intranet Design/Administration Consulting
    -Maintained, Developed, and Extended intra-/extra-net software
     for various companies and projects. Generally SQL/Perl based.     

  1998-2000:  Art Institutes International SF - Statistics Instructor
    -Developed and taught entire two quarter sequence in statistics
      (Teaching statistics to art/design students, as well as my extensive
      TA/tutor experience, has developed what I consider a key ability:
      Communicating complex technical ideas to non-specialists.)

  1997-1999:  UC Santa Cruz math department - Contract Developer/Trainer/TA
    -TA/tutor for many applied math/physics courses
    -Instructional Improvement Grant 
      (Web interface for LaTeX-HTML translation/publishing)
    -Educational Web Publishing Consulting 
      (helped faculty and graduate students create and publish web pages,
      LaTeX, and other complex documents (Mathematica/Matlab, etc.) as well
      as creating privacy-secure system for web publishing course scores.)     
    -Systems/Web Admin (FreeBSD/Apache webserver, general IT support)

   1996-1999:  ASIS Telemedia - Contract Developer/Trainer
    -Taught Web Design Classes 
    -Design & Programming Consulting (http://www.asis.com)
      -HTTP/SQL/Perl system for managing site resources
      -HTML/CGI design and support